Official git repository for Biopython (originally converted from CVS)
python bioinformatics genomics protein-structure dna protein biopython phylogenetics sequence-alignment
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Jul 6, 2026 - Python
dna - 技术专题
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DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
science machine-learning bioinformatics deep-learning genomics genome tensorflow ngs sequencing dna deep-neural-network deepvariant
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Mar 19, 2026 - Python
Official code repository for GATK versions 4 and up
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Jul 10, 2026 - Java
Data intensive science for everyone.
science workflow bioinformatics pipeline genomics workflow-engine ngs sequencing dna usegalaxy hacktoberfest
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Jul 12, 2026 - Python
tools for working with genome variation graphs
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Jul 10, 2026 - C++
Foundation Models for Genomics & Transcriptomics
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Feb 24, 2026 - Jupyter Notebook
Python and C++ code for reading and writing genomics data.
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Dec 9, 2021 - C++
In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more
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Feb 17, 2024 - Python
A Go package for engineering organisms.
go bioinformatics synthetic-biology computational-biology dna genbank alignment fasta molecular-biology mash synbio bioengineering primer-design golden-gate dna-barcode plasmids dna-barcoding codon-optimizer genetic-engineering sequence-hashing
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Jun 10, 2026 - Go
Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design
jupyter-notebook dna rosetta rna-structure-prediction protein-design protein-folding protein-structure-prediction google-colab pyrosetta protein-docking
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Feb 27, 2026 - Jupyter Notebook
二重螺旋 后台副本挂机 Automation for Duet Night Abyss
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Jun 12, 2026 - Python
3d engine implementation in DNA code!
biology dna chemical-kinetics cube 3d chemical-reaction-networks molecular-biology 3d-engine chemical-reactions raymarching in-vitro piperine strand-displacement molecular-programming real-reactive-programming
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Nov 29, 2020
[ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome
transcription-factors genome splice dna dataset promoters promoter transcription-factor-binding language-model genome-analysis promoter-analysis transcription-factor-binding-site covid dna-processing splice-site dna-training
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Jan 1, 2026 - Shell
A tool to map bisulfite converted sequence reads and determine cytosine methylation states
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Jul 12, 2026 - Rust
Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
bioinformatics chemistry structural-biology molecular-structures protein-structure artificial-intelligence dna protein proteomics docking peptides molecular-biology protein-design protein-protein-interaction swarm-intelligence structural-bioinformatics protein-dna-interactions bioinformatics-tool glowworm-swarm-optimization protein-docking
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Jul 8, 2026 - Python
BioReason: Incentivizing Multimodal Biological Reasoning within a DNA-LLM Model | NeurIPS '25
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May 28, 2026 - Jupyter Notebook
Genomic Pre-trained Network
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Jun 5, 2026 - Jupyter Notebook