Here are 106 public repositories matching this topic...

Slicer / Slicer

Multi-platform, free open source software for visualization and image computing.

Updated Apr 29, 2026
C++

commontk / CTK

A set of common support code for medical imaging, surgical navigation, and related purposes.

python open-source c-plus-plus qt plugin-manager cross-platform dicom osgi medical-imaging vtk itk mitk 3d-slicer

Updated Apr 25, 2026
C++

Slicer / SlicerGitSVNArchive

⚠️ OBSOLETE | Multi-platform, free open source software for visualization and image computing.

Updated Feb 22, 2022
C++

QIICR / dcmqi

dcmqi (DICOM for Quantitative Imaging) is a C++ library for conversion between imaging research formats and the standard DICOM representation for image analysis results

dicom quantitative-imaging imaging-informatics converters cancer-imaging-research medical-image-computing 3d-slicer nci-itcr tcia-dac nci-qin 3d-slicer-extension

Updated Apr 20, 2026
C++

KitwareMedical / SlicerVirtualReality

A Slicer extension that enables user to interact with a Slicer scene using virtual reality.

cmake openvr vtk 3d-slicer kitware 3d-slicer-extension

Updated Apr 15, 2026
C++

AIM-Harvard / SlicerRadiomics

A Slicer extension to provide a GUI around pyradiomics

cancer quantitative-imaging imaging 3d-slicer clinical-research radiomics nciitcr nci-itcr

Updated Oct 24, 2025
Python

revarbat / mandoline-py

A 3D printing STL-to-GCode slicer based on the Clipper library.

3d-slicer stl-slicer

Updated May 11, 2022
Python

NA-MIC / ProjectWeek

Website for NA-MIC Project Weeks

open-healthcare open-source hackathon reproducible-research medical-imaging 3d-slicer international-conference

Updated Apr 28, 2026
HTML

SlicerDMRI / SlicerDMRI

Diffusion MRI analysis and visualization in 3D Slicer open source medical imaging platform.

neuroimaging medical-image-computing diffusion-mri 3d-slicer tractography 3d-slicer-extension

Updated Apr 11, 2026
C++

Slicer / ExtensionsIndex

Slicer extensions index

python qt cross-platform image-processing medical-imaging registration neuroimaging segmentation vtk national-institutes-of-health medical-image-computing 3d-slicer nih 3d-slicer-extension

Updated Apr 23, 2026
Python

Slicer / SlicerNotebooks

Examples that illustrate how to use 3D Slicer via Jupyter notebooks in Python

python binder jupyter-notebook 3d-slicer

Updated Sep 20, 2022
Jupyter Notebook

Slicer / SlicerDocker

Build, package, test, and run 3D Slicer and Slicer Extensions in Docker.

3d-slicer

Updated Apr 29, 2026
Shell

mazurowski-lab / SlicerSegmentWithSAM

3D Slicer extension for Segment Anything Model (SAM) developed by Meta

segmentation 3d-slicer 3d-slicer-extension medical-image-segmentation segment-anything-model

Updated Jun 2, 2025
Python

Kitware / SlicerSALT

An open-source, free comprehensive software that will allow biomedical scientists to precisely locate shape changes in their imaging studies. This software called Slicer Shape AnaLysis Toolbox (SlicerSALT), will enhance the intuitiveness and ease of use for such studies, as well as allow researchers to find shape changes with higher statistical …

3d-slicer kitware shape-analysis 3d-slicer-custom-application

Updated Mar 6, 2026
Python

KitwareMedical / SlicerCustomAppTemplate

Template to be used as a starting point for creating a custom 3D Slicer application

python c-plus-plus cross-platform image-processing registration segmentation vtk itk medical-image-computing 3d-slicer kitware 3d-slicer-custom-application

Updated Jan 23, 2026
C++

KitwareMedical / trame-slicer

Bring the capabilities of 3D Slicer to the web with modern UI using the trame framework!

vue medical-imaging 3d-slicer trame

Updated Apr 29, 2026
Python

Slicer / SlicerExecutionModel

An open-source CMake-based project that provides macros and associated tools for the easy building of 3D Slicer command line interface (CLI) modules.

c-plus-plus cross-platform medical-imaging command-line-parser 3d-slicer kitware

Updated Mar 21, 2026
C++

DeepInfer / Slicer-DeepInfer

3D Slicer Module for connecting to model repository and use models for image analysis.

docker machine-learning deep-learning image-analysis 3d-slicer

Updated Oct 5, 2023
Python

SenonETS / 3DSlicerTutorial_ExtensionModuleDevelopment

SourceCode of serial tutorials on 3D Slicer extension development for beginners

python image-processing qt5 vtk landmark-detection spine qt5-gui 3d-slicer tutorial-sourcecode 3d-slicer-extension ultrasound-imaging landmark-recognition landmark-localization laminas-api-tools spine-deformity

Updated Jan 11, 2023
Python

KitwareMedical / SlicerITKUltrasound

Ultrasound image formation, processing, and analysis. Interfaces built off the ITKUltrasound library.

itk ultrasound insight-toolkit 3d-slicer arfi 3d-slicer-extension

Updated Jan 30, 2024
C++